Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRTWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
2CIG Chain:A ((1-159))
MVGLIWAQATSGVIGRGGDIPWRLPEDQAHFREITMGHTIVMGRRVWDSLPAKVRPLPGRRNVVLSRQADFMASGAEVVGSLEEALTSPETWVIGGGQVYALALPYATRCEVTEVDIGLPREAGDALAPVLDETWRGETGEWRFSRSGLRYRLYSYHRS
General information:
TITO was launched using:
RESULT:
Template:
2CIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93018 for 1176 contacts (-79.1/contact) +
2D Compatibility (PS) -17203 + (NN) -8968 + (LL) 0
1D Compatibility (HY) -21200 + (ID) 7900
Total energy: -148289.0 ( -126.10 by residue)
QMean score : 0.880
(partial model without unconserved sides chains):
PDB file :
Tito_2CIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CIG-query.scw
PDB file :
Tito_Scwrl_2CIG.pdb
: