Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSATGPGIVVIDKPAGMTSHDVVGRCRRIFATRRVGHAGTLDPMATGVLVIGIERATKILGLLTAAPKSYAATIRLGQTTSTEDAEGQVLQSVPAKHLTIEAIDAAMERLRGEIRQVPSSVSAIKVGGRRAYRLARQGRSVQLEARPIRIDRFELLAARRRDQLIDIDVEIDCSSGTYIRALARDLGDALGVGGHVTALRRTRVGRFELDQAR-SLDDLAERPALSLSLDEACLLMFARRDLTAAEASAAANGRSLPAVGIDGVYAACDADGRVIALLRDEGSRTRSVAVLRPATMHPG |
| 3HJW Chain:A ((40-248)) | ------GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLHGDVP----EDKIIQ--------------VMKEFEGEIIQRPPLRSAVK---RR--------------LRTRKVYYIEVLEIEGRDVLFRVGVE----AGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVD---YYYFWKEDGIEEYFRKAIQPMEKAV----EHLPKVWI-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111761 for 1563 contacts (-71.5/contact) +
2D Compatibility (PS) -21400 + (NN) -1556 + (LL) 5172
1D Compatibility (HY) -15600 + (ID) 4100
Total energy: -149245.0 ( -95.49 by residue)
QMean score : 0.458
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