Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDIVTIFPACLDPLRQ-SLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKAPVWGEAL---DEICSSETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD
4MCC Chain:A ((1-219))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEID----EEWSIGDYVLTGGELPAMTLIDAVARFIPGVLG----------------LLDCPHYTRPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLR--------
General information:
TITO was launched using:
RESULT:
Template:
4MCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124861 for 1429 contacts (-87.4/contact) +
2D Compatibility (PS) -21549 + (NN) -7064 + (LL) 164
1D Compatibility (HY) -20000 + (ID) 4200
Total energy: -177510.0 ( -124.22 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_4MCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MCC-query.scw
PDB file :
Tito_Scwrl_4MCC.pdb
: