Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSANDRRDRRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIAVGITPAGSWVLTDANPDALTITNRELPQVKSGSGTELALPADPRRGGQLVSLPPGAGEVLESVDVVFPVLHGPYGEDGTIQGLLELAGVPYVGAGVLASAVGMDKEFTKKLLAADGLPVGAYAVLRPPRSTLHRQE-------CERLGLPVFVKPARGGSSIGVSRVSSWDQLPAAVARARRHDPKVIVEAAISGRELECGVL--EMPDGTLEASTLGEIRVAGVRGREDSFYDFATKYLDDAAELDVPAKVDDQVAEAIRQLAIRAFAAIDCRGLARVDFFLTDDGPV-INEINTMPGFTTISMYPRMWAASGVDYPTLLATMIETTLARGVGLH |
2I8C Chain:A ((3-344)) | ---------KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDW--RKQNNITAEIKSTDELHLENGEALEISQLLKESSSGQ-------------PYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFL--RSEYEKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVVKDV----------AF-----------VQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTAFSMYPKLWENMGLSYPELITKLIELAKER----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174243 for 2586 contacts (-67.4/contact) +
2D Compatibility (PS) -36007 + (NN) -21974 + (LL) 2340
1D Compatibility (HY) -30000 + (ID) 6400
Total energy: -266284.0 ( -102.97 by residue)
QMean score : 0.521
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