Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDYKLFRCIQCGFEYDEALGWPEDGIAAGTRWDDIPDDWSCPDCGAAKSDFEMVEVARS
8RXN Chain:A ((2-50))
----KKYVCTVCGYEYDPAEGDPDNGVKPGTSFDDLPADWVCPVCGAPKSEFE-------
General information:
TITO was launched using:
RESULT:
Template:
8RXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9016 for 287 contacts (-31.4/contact) +
2D Compatibility (PS) -5279 + (NN) -5702 + (LL) 1056
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -23491.0 ( -81.85 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_8RXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-8RXN-query.scw
PDB file :
Tito_Scwrl_8RXN.pdb
: