Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLPADPSPTLSAYAHPERLVTADWLSAHMGA----PGLAIVESD-------EDVLLYDVGHIPGAVKIDWHT--DLNDPRVRDYINGEQFAELMDRKGIARDDTVVIYG--DKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPTKTCTGYPVVQRNDAPIRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLYDFINPD--DQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEEPGVVPVV |
| 1BOH Chain:A ((9-278)) | -------------------LVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSE-PSRPEPAIFKATLNRSLLKTY-EQVLENLESKRFQLVDSRAQGRYLGTQPE----PDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIAT-RKGVTACHI-ALAAYLCGKPDVAIYDGSWFEW-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1BOH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110420 for 2038 contacts (-54.2/contact) +
2D Compatibility (PS) -27044 + (NN) -16622 + (LL) 2268
1D Compatibility (HY) -14000 + (ID) 4000
Total energy: -169818.0 ( -83.33 by residue)
QMean score : 0.403
|
|
|