Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAVLRRTVGAQWPILAGVNFWRRGALLIGIGVGVAAVLRLVLSEERAGLLVVRSKGIDFVTTVTVAAAMVYIASTIDPLGTG
3NY5 Chain:A ((155-177))
--------------------------------------PIVRVFLPNKQRTVVPARC----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NY5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7938 for 67 contacts (-118.5/contact) +
2D Compatibility (PS) -1897 + (NN) 949 + (LL) 5364
1D Compatibility (HY) -2000 + (ID) 150
Total energy: -5672.0 ( -84.66 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_3NY5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NY5-query.scw
PDB file :
Tito_Scwrl_3NY5.pdb
: