Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVEDAIR--LVQGDITDAELVSQLVAE--SDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRH----------GVRLHHISTDEVYGDLELDDRAR-------FTESTPYNPSSPYSATKAGADMLVRAWVRSYGVRATISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGANVRDWIHVDDHNSAVRRILDRGRIGRTYLISSEGERDNLTVLRTLLRLMDRDP-------DDFDHVTDRVGHDLRYAIDPSTLYDELCWAPKHTDFEEGLRTTIDWYRDNESWWRPLKDATEARYQERGQ |
| 1KEU Chain:A ((1-355)) | MKILITGGAGFIGSAVVRHIIK-NTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRYAIDAGKISRELGWKPLET-FESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KEU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110403 for 2771 contacts (-39.8/contact) +
2D Compatibility (PS) -35339 + (NN) -15832 + (LL) -24
1D Compatibility (HY) -28800 + (ID) 7500
Total energy: -197898.0 ( -71.42 by residue)
QMean score : 0.483
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