Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVYTGSDAGDHASAPQPSGSGSVPASVNVPGLVVAAVWAVGLVAGLVALTIGHLAVAAAALVVAVMAPWCRVAYIAHGQHRVCGETLRGTPAGETASFPTGWRGLRFSTR
1HGV Chain:A ((14-36))
--------------------------NYIQAIAAAGVGVLALAIGLSAA-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HGV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7522 for 95 contacts (-79.2/contact) +
2D Compatibility (PS) -2198 + (NN) -138 + (LL) 4576
1D Compatibility (HY) 400 + (ID) 300
Total energy: -5182.0 ( -54.55 by residue)
QMean score : 0.310
(partial model without unconserved sides chains):
PDB file :
Tito_1HGV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HGV-query.scw
PDB file :
Tito_Scwrl_1HGV.pdb
: