Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALVVQKYGGSSVADAERIRRVAERIVATKKQGNDVVVVVSAMGDTTDD----------------------------------------------LLDLAQQVCPAPPPREL-----DMLLTAGERISNALVAMAIESLGAHARSFTGSQAGVITTGTHGNAKIIDVT----PGRLQT-ALEEGRVVLVAGFQGVSQDTKDVTTLGRGGSDTTAVAMAAALGADVCEIYTDVDGIFSADPRIVRNARKLDTVTFEEMLEMAACGAKVLMLRCVEYARRHNIPVHVRSSYSDR-PGTVVVGSIKDVPMEDPILTGVAHDRSEAKVTIVGLPDI--PGYAAKVFRAVADADVNIDMVLQNVSKVEDGKT-DITFTCSRDVGPAAVEKLDSLRNEIGFSQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TSEIRISVLCRDTELDKAVVALHEAFGLGGDEEATVYAGTGR |
| 2CDQ Chain:A ((30-487)) | ----VMKFGGSSVASAERMKEVADLILTFPEESP--VIVLSAMGKTTNNLLLAGEKAVSCGVSNASEIEELSIIKELHIRTVKELNIDPSVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATYPAVAKRLYDDWMHDPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRATPVPYLTFDEAAELAYFGAQVLHPQSMRPAREGEIPVRVKNSYNPKAPGTIIT---KTRDMTKSILTSIVLKRNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV--ATSEVSISLTLDPSKLWSRELIQQELDHVVEELEKIAVVNLLKGRAI--ISLIGNVQHSSLILERAF-HVLYTKGVNVQMISQGASKVNISFIVNEAEAEGCVQALHKSFFESGD----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198148 for 3231 contacts (-61.3/contact) +
2D Compatibility (PS) -43620 + (NN) -18952 + (LL) 1724
1D Compatibility (HY) -30400 + (ID) 7050
Total energy: -296446.0 ( -91.75 by residue)
QMean score : 0.430
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