Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGVLVAAATPIISSASATPANIAGMVVFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQGQAR
4M6I Chain:B ((7-221))
----------------------NIAGMVVFIDPGH--------------------------TSTNSGYPEHTFTWETGLRLRAALNALGVRTALS---------------NMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQFARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGVAGFLATQ----
General information:
TITO was launched using:
RESULT:
Template:
4M6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90110 for 1505 contacts (-59.9/contact) +
2D Compatibility (PS) -19435 + (NN) -13136 + (LL) 2364
1D Compatibility (HY) -20800 + (ID) 8700
Total energy: -149817.0 ( -99.55 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_4M6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4M6I-query.scw
PDB file :
Tito_Scwrl_4M6I.pdb
: