Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPS--VRAAIDR-ATDTVNRYPDNGCVQLKAALARHLGPDF-APEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLTDHTFDLYAMLATVTDRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTDTVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAADARIVVRPYGTDGVRVTVAAPEENDAFLRFARRWRSDQ |
| 1UU2 Chain:A ((24-329)) | --------------------------LALNENPF-PFPEDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGA----DEIIYVMMLMFDRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK---DLRIPEVNVGE-GDVVFIPNPNNPTGHVFEREEIERILKT---GAFVALDEAYYEFHGESY----VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIGKREENDMILR--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UU2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196715 for 2456 contacts (-80.1/contact) +
2D Compatibility (PS) -32980 + (NN) -14108 + (LL) 2852
1D Compatibility (HY) -23600 + (ID) 4850
Total energy: -269401.0 ( -109.69 by residue)
QMean score : 0.540
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