Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKGRSALLRALWIAALSFGLGGVAVAAEPTAKAAPYENLMVPSPSMGRDIPVAFLAGGPHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMYTNWEQ-------DGSKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTTNGAIAAGMQQFGGVDTNGMWGAPQLGRWKWHDPWVHASLLAQNNTRVWVW----SPTNPGASDPAAMIGQAAEAMGNSRMFYNQYRSVGGHNGHFDFPASGDNGWGSWAPQLGAMSGDIVGAIR
1VA5 Chain:A ((8-277))----------------------------------PVEYLQVPSASMGRDIKVQFQGGGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYCGNGTPSDLGGDNIPAKFLEGLTLRTN-QTFRDTYAADGGRNGVFNFPPNGTHSWPYWNEQLVAMKADI-----


General information:
TITO was launched using:
RESULT:

Template: 1VA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115774 for 2284 contacts (-50.7/contact) +
2D Compatibility (PS) -28866 + (NN) -19186 + (LL) 3444
1D Compatibility (HY) -18400 + (ID) 5650
Total energy: -184432.0 ( -80.75 by residue)
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_1VA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VA5-query.scw
PDB file : Tito_Scwrl_1VA5.pdb: