Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDLKLLREN----PDAVRRSQLSRGEDPALVDALLTADAARRAVISTADSLRAEQKAASKSVGGASPEERP--------------PLLRRAKELA-EQVKAAEADEVEAEAAFTAAHLAISNVIVDGVPAGGEDDY--AVLDVVGEPSYLENPKDHLELGESLGLIDMQRGAKVSGSRFYFLTGRGALLQLGLLQLALKLAVDNGFVPTIPPVLVRPEVMVGTGFLGAHAEEVYRVEGDG-----------LYLVGTSEVPLAGYHSGEILDLSRGPLRYAGWSSCFRREAGSHGKDTRGIIRVHQFDKVEGFVYCTPADAE--HEHERLLGWQRQMLARIEVPYRVIDVAAGDLGSSAARKFDCEAWIPTQGAYRELTSTSNCTTFQARRLATRY---RDASGKPQIAATLNGTL-ATTRWLVAILENHQRPDGSVRVPDALVPFV--GVEVLEPVA |
| 4RQF Chain:A ((2-469)) | VLDLDLFRVDKGGDPALIRETQEKRFKDPGLVDQLVKADSEWRRCRFRADNLNKLKNLCSKTI---------FDDLTADALANLKVSQIKKVRLLIDEAILKCDAERIKLEAERFENLREIGNLLHPSVPISNDEDVDNKVERIWGDCT-VRKKYSHVDLVVMVDGFEGEKGAVVAGSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLIATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFYQSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQT--MMDKVEFVHMLNATMCATTRTICAILENYQTKKG-ITVPEKLKEFMPPGLQELIP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RQF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146207 for 3226 contacts (-45.3/contact) +
2D Compatibility (PS) -44284 + (NN) -25775 + (LL) 224
1D Compatibility (HY) -33600 + (ID) 7800
Total energy: -257442.0 ( -79.80 by residue)
QMean score : 0.425
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