Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLFGKRKSRATRRAEARAIKARAKLEAKLSAKNEARRIKAAQRAESKALKAQLKARRDSDRAALKVAEAELKVAREGKLLSPTRIRRLLTVSRLLAPILTPVIYRAAMAARGLIDQRRADQLGVPLAQIGRFSGHGARLSARVGGAERSLRMVQEKKPKDVETKQFVSAVTNRLTDLSAAVAAAEHMP---------AKRRRTAHSAISSQLDGIEADLMARLGLT |
4DND Chain:A ((52-106)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------NGLRSIEWDLEDLEETIGIVEANPGKFKLPAGDLQERKVFVERMREAVQEMKDHM------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1284 for 198 contacts (-6.5/contact) +
2D Compatibility (PS) -4774 + (NN) -3457 + (LL) 14784
1D Compatibility (HY) 0 + (ID) 300
Total energy: 4969.0 ( 25.10 by residue)
QMean score : 0.440
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