Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARYRFVVQNWCRFAIWLTRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLSQVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPG-----TIQVVIGPAMHAEGEGPRAIAEL---NQRAEAWVSETMAEISPIQQRVSHPEPSVVS |
3H46 Chain:O ((38-84)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H46.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3421 for 133 contacts (-25.7/contact) +
2D Compatibility (PS) -4008 + (NN) -2057 + (LL) 15484
1D Compatibility (HY) -2800 + (ID) 900
Total energy: 2298.0 ( 17.28 by residue)
QMean score : 0.146
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