Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSLLILDRDGVINLD-SDDYIKTLDEWIPIPSSIEAIARLSQAGWTVAVATNQSGIARGYYDLAVLEAMHARLRELVAEQGGEVGLIVYCPHGPDDGCDCRKPKPGMLRQIGEHYGVDLSGIWFVGDSIGDLEAARAVDCQPVLVKTGKGVRTLGKPLPEGTLIFDDLAAVASALLQ
2FPR Chain:A ((14-152))
--QKYLFIDRDGTLISEP-DFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYL----MDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGEQLT-----------------
General information:
TITO was launched using:
RESULT:
Template:
2FPR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79525 for 962 contacts (-82.7/contact) +
2D Compatibility (PS) -15120 + (NN) -15164 + (LL) 924
1D Compatibility (HY) -9200 + (ID) 1850
Total energy: -119935.0 ( -124.67 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_2FPR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FPR-query.scw
PDB file :
Tito_Scwrl_2FPR.pdb
: