Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSASSPAAWRGTLAGLIAFHIFIIIASNYLVQLPITLFGWHTTWGAFSFPFIFLATDLTVRLLGKGPARLVIARVMIPALIASYVVSVLFQEAAFRGFSALLEFNTFVARISLASFLAYVLGQILDIQVFDRLRRSRHWWTAPVASTILGNLLDTFTFFFVAFWRSDNPFMAQHWVEIATVDYGVKLSISLLLFVPLYGMLLNGILKMLPGRPQSNA |
| 3AQP Chain:A ((677-726)) | -------------------------------------------------------------------------------------------------------------------------------------------------------LTTLLPILALLFLGG-SV--LRDFALAIFVGIFVGTYSS-IYVVSALVVAWKNR------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -15360 for 257 contacts (-59.8/contact) +
2D Compatibility (PS) -4956 + (NN) -78 + (LL) 14716
1D Compatibility (HY) -3600 + (ID) 300
Total energy: -9578.0 ( -37.27 by residue)
QMean score : -0.125
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