Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQERSVPSYVEYPYEQAILYVHRNASANEMLESVQERLRALLGLLHALERIEVRTGLGVPIQRVAHILVTLGGDALTLLTAAHRATTS
3POT Chain:A ((70-127))
MPYQVSTTDTYVE----GDDLHFVNNAAMQQMWDDI--RRTVIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMPGAAVVQEHMVET
General information:
TITO was launched using:
RESULT:
Template:
3POT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4468 for 240 contacts (18.6/contact) +
2D Compatibility (PS) -5936 + (NN) 475 + (LL) 372
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -3171.0 ( -13.21 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_3POT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3POT-query.scw
PDB file :
Tito_Scwrl_3POT.pdb
: