Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAGRGQKLMPSAVKSLALEHGLPVMQPQSLR-----NAEAQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWRGAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDR-LAALGPKAVIEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPVCHTSLADAPLKVLGASLGQG-----SGAPGTILEASR------DGLLVACGEGALRLTR-LQLPGGKPLAFADLYNSRREQFAAGQVLGQ |
| 4R8V Chain:A ((1-299)) | ----MKIAVIGQSLFGQEVYKELKNEGHMIVGVFTIPDKDG----KVDPLAIE--AEKDGVPVFKFPRWRLKGKAITEVVDQYKAVGAELNVLPFCSQFIPMEVIDHPKHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFTVFWADDGLDTGPILLQRECDVEPNDNVNSIYKRFLFPEGVKGMVEAVRLIATGKAPRIKQPEEGATYECIQKKENSKIDWNQPAEAIHNWIRGNDRVPGAWAEIDGKSVSFYGSTLLENDHFSSNGQPLEIPGASRAALVTKNGLVLFGNDGKMLLVKNLQFEDGKMIPGSQYFK-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R8V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173173 for 2291 contacts (-75.6/contact) +
2D Compatibility (PS) -30709 + (NN) -12347 + (LL) 1432
1D Compatibility (HY) -16000 + (ID) 4600
Total energy: -235397.0 ( -102.75 by residue)
QMean score : 0.493
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