Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTDRIAAVKTYLLDLQDRICAALEAEDGKARFAEDAWERPAGGGGRTRVIGDGALIEKGGVNFSHVFGDSLPPSASAHR----PELAGRGFQALGVSLVIHPENPHVPTSHANVRFFCA-EKEGEEPVWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLKHRNEPRGIGGLFFDDLNQWDFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQAYRRGRYVEFNLVFDRGTLFGLQSGGRTESILMSLPPQVRWGYDWKPEPGSEEARLTEYFLADRDWLAGQP |
1TK1 Chain:A ((24-265)) | ---------------QAEITQGLESID-TVKFHA--------GGGTSMVIQDGTTFEKGGVNVSVVYGQLSPAAVSAMKADHK---DGVKFFACGLSMVIHPVNPHAPTTHLNYRYFETWNQDGTPQTWWFGGGADLTPSYLYEEDGQLFHQLHKDALDKHDTALYPRFKK---------------GIGGIFFDDYDERDPQEILKMVEDCFDAFLPSYLTIVKRRKDMPYTKEEQQWQAIRRGR----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92856 for 1478 contacts (-62.8/contact) +
2D Compatibility (PS) -21196 + (NN) -7037 + (LL) 6132
1D Compatibility (HY) -14400 + (ID) 4500
Total energy: -133857.0 ( -90.57 by residue)
QMean score : 0.521
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