Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTFARLAAGLCICAIASQANAWSQPTHKNIVKDALAFMNSSYATEEMRQAYRFYVSAAGSEAQAGEILGQAAFDVDDFKDTRLGGWWVGYEHAPLWGAASGIVNYTSYWHFLNLARDGDSHGNPHGGYDYRYHKVDGGIADV----------DWYAMVYLYNRELKREDFDTTEAHYRQGTRSDWQEHYGDFQTAAFQPIDNLATYWFEQFRAAPSLQTIGYALHATGDVAQPHHVWITSANGHSSWEGWVDDHYASEKLNDPAAVANLVGRYDPSKSIRDLLTQTGQVAYARPEPLYDTSYETRLRVAKELIPESIALTVTVLTKGANSFDAPTAL |
2NQY Chain:A ((6-134)) | -----------------------------------------------------------------------------------------------------------------------NSTGN-HDGYDYEFWKDSGGSGTMILNSGGTFSASWSSVSNILFRKGKK--FNETQTHQQVGNMSI---SYG----ANFQPSGN-AYLCVYGWTVSPLVEY--YIVDSWGNWRPPG----ATPKGTITVDGGTYDIYETDRTNQPSIKGVATFSQYWSTRRSKRTSGTISVSNHFRAWESLGMNMGDMYEVALTVEGYQSSGSANVYSNTLRINGNPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NQY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1518 for 606 contacts (-2.5/contact) +
2D Compatibility (PS) -12041 + (NN) 1315 + (LL) 9904
1D Compatibility (HY) -4000 + (ID) 1850
Total energy: -8190.0 ( -13.51 by residue)
QMean score : 0.076
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