Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRLQTRFAQLKQENRAALVTFVTAGDPDYASSLEILKGLPAAGADVIELGMPFTDPMADGPAIQLANIRALDGGQTLARTLQMVREFRSGDSETPLVLMGYFNPIHHYGVERFIAEAKEVGVDGLIVVDLPPEHNEDLCHPAQAAGIDFIRLTTPTTGDQRLPTVLEGSSGFVYYVSVAGVTGANAATLEHVEEAVARLRRHTDLPIGIGFGIRSAEHAAAVARL-ADGVVVGSALIDRIAKARDNAQAVKDVLALCGELAEGVRNAR
1TJR Chain:A ((9-259))--------AALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREV-TPELSCPVVLLSYYKPIMS----RSLAEMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEAASPKQGLRRL----EEYARGMKNAL


General information:
TITO was launched using:
RESULT:

Template: 1TJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156299 for 2174 contacts (-71.9/contact) +
2D Compatibility (PS) -28163 + (NN) -17991 + (LL) 1728
1D Compatibility (HY) -23200 + (ID) 5150
Total energy: -229075.0 ( -105.37 by residue)
QMean score : 0.614

(partial model without unconserved sides chains):
PDB file : Tito_1TJR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1TJR-query.scw
PDB file : Tito_Scwrl_1TJR.pdb: