Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFMKKLMLAVGLFAVAGSAFAAKPCEELKAEIDAKIKAN---GVP-AYTLEIVDKGSVTDKKVVGTCDGGTKEIVYQRG
1IB8 Chain:A ((55-89))
----------------------NDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGL
General information:
TITO was launched using:
RESULT:
Template:
1IB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5549 for 112 contacts (-49.5/contact) +
2D Compatibility (PS) -3528 + (NN) -2436 + (LL) 2552
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -11361.0 ( -101.44 by residue)
QMean score : 0.745
(partial model without unconserved sides chains):
PDB file :
Tito_1IB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IB8-query.scw
PDB file :
Tito_Scwrl_1IB8.pdb
: