Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTIGLGIATLLFSATALAAPKPCEELKAEIETKIQSAGVTSYTLEIVRNDEVSDPNMVVGSCENGTKKIIYQKNDD
2NOC Chain:A ((50-75))
----------------------SPLDAREDLIKKADEKGADVVVLTSGQTENKIHGTADIYKKKLEHHHHHH-----
General information:
TITO was launched using:
RESULT:
Template:
2NOC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4102 for 107 contacts (-38.3/contact) +
2D Compatibility (PS) -2787 + (NN) -602 + (LL) 2184
1D Compatibility (HY) 1200 + (ID) 150
Total energy: -4257.0 ( -39.79 by residue)
QMean score : 0.705
(partial model without unconserved sides chains):
PDB file :
Tito_2NOC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2NOC-query.scw
PDB file :
Tito_Scwrl_2NOC.pdb
: