Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSTTSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPQAAVADRKFLEIDVDNFDARLKAMKPRVAFNVPNVLTGEGNLSLDITFESMDDFSPAAVARKVDSLNKLLEARTQLANLLTYMDGKTGAEEMIMKAIKDPALLQALASAPKPKDDEPQA |
| 3RKG Chain:A ((164-203)) | --------------------------------------------------------------------------------------------------------------------LKLRHLLIKSKDLTLFYQKT---LLIRDLLDELLENDDDLANMYLTVKKSPKDNFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4388 for 158 contacts (-27.8/contact) +
2D Compatibility (PS) -4482 + (NN) -4318 + (LL) 8016
1D Compatibility (HY) -2800 + (ID) 250
Total energy: -8222.0 ( -52.04 by residue)
QMean score : 0.328
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