Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAELTLQERLQPSLLDRLTDDEPGNLKEAAERRVLTLNQLKASVLRDLAWLFNTTSLFDHGPAARMPAGNSVLNYGLPALAGHTASSVDVHAI---EALLTETIATFEPRIIRSSLRVRAQLLPGEMDHNALSFEIEGDLWAE---PAPLRLLLTTNLDLETGHVRVAQGERRRT
3N4P Chain:A ((92-171))
-----------------------------------------------------------------------FLIYGLEHFFL---SESSEVAIAECAAHMIISVLSLHPYLD--ELRIAVEGNT----NQAAAVRIACLIRQSVQSSTLIRVLFYHTPDQNHIEQPFYLMGRDKA
General information:
TITO was launched using:
RESULT:
Template:
3N4P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21632 for 364 contacts (-59.4/contact) +
2D Compatibility (PS) -7523 + (NN) -867 + (LL) 5236
1D Compatibility (HY) -4400 + (ID) 750
Total energy: -29936.0 ( -82.24 by residue)
QMean score : 0.232
(partial model without unconserved sides chains):
PDB file :
Tito_3N4P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N4P-query.scw
PDB file :
Tito_Scwrl_3N4P.pdb
: