Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVDGFVQPVGEGLADQLVGHQVGYGGVQWDQCLAEVGDVAVVHFFHQAVRQVGFVEQGVEAVVAGEQRRRGEEELLGDLQHRLDPFLDAGFAGHAVGGVEQVRYLFDVGVDEAGEYVFRVLALRLDGAMQVGQAAGYQISQVTVAGFAEVRLLDEFTEGSGVHGVSHTTGMVKKRRNIAGGARRLRRDCHNRFVVMRG |
| 3LIY Chain:A ((25-39)) | ---------------------------------------------------------------------------------------------------KTIEALLDTGADMTVIPIALFSSNTPLKNTSVLGAGGQTQDHFKLTSLPVLIRLPFRTTPIVLTSCLVDTKNNWAIIGRDALQQCQGVLYLP------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1287 for 38 contacts (-33.9/contact) +
2D Compatibility (PS) -1605 + (NN) -451 + (LL) 7468
1D Compatibility (HY) 0 + (ID) 200
Total energy: 3925.0 ( 103.29 by residue)
QMean score : -0.108
|
|
|