Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKVAIVLLLLATLVSLFSGLFFLVKDQGHGSRVVNSLTVRVVLAAATLVLVAWGFYSGELNSHAPWHF
1ZOY Chain:C ((84-113))
-IYTAKFGIVFPLMYHTWNGIRHLIWDLGKGLTIPQLTQSGVVVLILTVLSSVGLAAM-----------
General information:
TITO was launched using:
RESULT:
Template:
1ZOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9814 for 115 contacts (-85.3/contact) +
2D Compatibility (PS) -3221 + (NN) -3860 + (LL) 1268
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -17927.0 ( -155.89 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_1ZOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZOY-query.scw
PDB file :
Tito_Scwrl_1ZOY.pdb
: