Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLKWTRKAAADLDAIYDHYVVLIGPEKALKAVQDIVEQVKPLQQVANQGAGRPSEVPGVRTLTLERWPFSAPFRVKGKEIQILRIDRVEITP |
1R94 Chain:A ((1-18)) | MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 401 for 62 contacts (6.5/contact) +
2D Compatibility (PS) -2075 + (NN) -488 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 250
Total energy: -4812.0 ( -77.61 by residue)
QMean score : 0.727
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