Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHQRIASIGLGLTLALGGSAQAAGQLNVVSW---SGYFSPQLLEKFEKESGIRVTVDSYDSNETLLAKLKQGGAGYDVAIPSQQFVPILVKEALLERFDPAAEPYYANLLDNLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAG-PADSYAVLYQPPEELRGRINMFDSVSE----VVDMASLYLGIPLCSADPKQMQRVLELLKAQKPFVKTYSSKAGSIRENLAAGEVDMSM---FWGGSSMRARELKPSLKYLYPKEGVLAWVDNLVIPRGSRNPDNARRFIAFLAQPENAALTQNFLKHQSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAIRLADRLWTNLMR |
| 4EDP Chain:A ((36-304)) | ------------------------KLVVSTWGLNEDVLKETVFEPFAKEHGVEIVLDIGNNSERLTKMKNNPNSQIDITYLAESFAEQGVEAGIFDKLDYSKIPNASEMNEKAKSTV---EAGYGPAYTLNSIGIVVDPS--AGIEINSWEDLWKP--ELKNKIAIPDITTTNGPAMVEIAAEKAGVDVKTDNGEAAFKELEALKPN--VVKTYS-KSSDLANMFSNGEIVAAVASDFAFGTISKA---KPEVINVIPESGTYLNFNTININKNSKNKDLAYEFINYALSKEVQEKTAKAL-NESPVNKEVKLSEEETKNLTYGPVVDNAKVIDFKFVNSVMDQWVNNWNRIMN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130518 for 2000 contacts (-65.3/contact) +
2D Compatibility (PS) -27755 + (NN) -16806 + (LL) 2060
1D Compatibility (HY) -10800 + (ID) 3250
Total energy: -187069.0 ( -93.53 by residue)
QMean score : 0.460
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