Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLKITDDCINCDV--CEPECPNGAISQGEEIYVIDPNLCTECVGHYDEPQC--QQVCPVDCIPLD-DANVESKDQLMEKYRKITGKA
1G3O Chain:A ((1-84))
-AFVVTDNCIKCKYTDCVEECPVDCFYEGPNFLVIHPDECIDCA--LCEPECPAQAIFSEDEVPEDMQEFIQLNAELAEVWPNITEKK
General information:
TITO was launched using:
RESULT:
Template:
1G3O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22718 for 553 contacts (-41.1/contact) +
2D Compatibility (PS) -8729 + (NN) -10083 + (LL) 80
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -50000.0 ( -90.42 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_1G3O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G3O-query.scw
PDB file :
Tito_Scwrl_1G3O.pdb
: