Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVASKEPIMSQSERRFSFEFFPAKTEAGHEKLLATARNLAGYKPDFFSCTYGAGGSTRDRTLSTVLQLDGEVKVPTAPHLSCVGDSKAELRELLGRYREAGIRRIVALRGDLPSGMGMASGELRYANELVDFIRTETGDHFHIEVAAYPEVHPQARSFEDDLANFVRKVKAGASSAITQYFFNADAYFYFVERVAKLGVDIPVVPGIMPITNYSKLARFSDACGAELPRWIRKQLEAYGDDSRSIQAFGEQVISEMCERLLEGGAPGLHFYTLNQADPSLAIWKNLQLPR
3FST Chain:A ((20-290))
----------QGQINVSFEFFPPRTSEMEQTLWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGDLP------E---MYASDLVTLLK-EVAD-FDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKLADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYTLNRAEMSYAICHTLGVRP
General information:
TITO was launched using:
RESULT:
Template:
3FST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164295 for 2159 contacts (-76.1/contact) +
2D Compatibility (PS) -29233 + (NN) -14768 + (LL) 1320
1D Compatibility (HY) -24000 + (ID) 5400
Total energy: -236376.0 ( -109.48 by residue)
QMean score : 0.677
(partial model without unconserved sides chains):
PDB file :
Tito_3FST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FST-query.scw
PDB file :
Tito_Scwrl_3FST.pdb
: