Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDTLAPESTRQNLRSQRLNLLTNEPHQRLESLV---KSKEPFASRDNFARFVAAQYLFQHDLEPLYRNEALARL--FPGLASRARDDAARADLADLGHPVPEGDQ-S------VRE-----ADLSLAEALGWLFVSE-GSKLGAAFLFKKA-AALELDENFGARHLAEPEGGR---AQGWK-SFVAILDGIELNEEEERLAAKGASDAFNRFGDLLERTFA
1WOV Chain:A ((2-209))
-----------TNLAQKLRYGTQQSHTLAENTAYMKCFLKGIVEREPFRQLLANLYYLYSALEAALRQHRDNEIISAIYFPELNRTDKLAEDLTYYYGPNWQQIIQPTPCAKIYVDRLKTIAASEPELLIAHCYTRYLGDLSGGQSLKNIIRSALQLPEGEGTAMYEFDSLPTPGDRRQFKEIYRDVLNSLPLDEATINRIVEEANYAFSLNREVMHDLED
General information:
TITO was launched using:
RESULT:
Template:
1WOV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17046 for 1317 contacts (-12.9/contact) +
2D Compatibility (PS) -20258 + (NN) -16024 + (LL) 712
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -59066.0 ( -44.85 by residue)
QMean score : 0.316
(partial model without unconserved sides chains):
PDB file :
Tito_1WOV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WOV-query.scw
PDB file :
Tito_Scwrl_1WOV.pdb
: