Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGYAERATTRRRQAGFTLIEVMVAIMLMAIVSLMAWRGLDSIARASAHLEDSTEQGAALLRALNQLERDIALHSAIREETGLPSGDEPIRAGDSLPPGLALKRLSE---IPLRLDIVRASTEPGAPLQRVRWWRQGKVLYRAASPSGDRLPLPPLAERVAVLDDVSRFDIRAWVPGKGWTRLPARS--------KVRASGLEISLARVTRNGVERYRRVVALQ |
3NJE Chain:A ((35-193)) | --------------------------------------------------RVQEQRMRELVRAMGALERDLTQAVERPVRDE--LGD-------NRG------AFLSEGENDQIVEFTRGGW-----LQRVRWSLSGETLERRYWLVLDRAQD-SKPRVQQVLDGVTALSWRFLDKEHNWQGHWPTDEGSEEERLESLPLAVEMTLEHRH-YG--KLVRVWRLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NJE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22754 for 946 contacts (-24.1/contact) +
2D Compatibility (PS) -14538 + (NN) -2614 + (LL) 5912
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -39244.0 ( -41.48 by residue)
QMean score : 0.326
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