Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLPAVTPGWPAIPPGATLGGFDGQGRRSWATISRAPSGASCSRNRSA-------TRTYGWGATATTPATITGIPSTTAPAT
1OGP Chain:A ((96-132))
---------------------------------------LQCAGNRRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLEL
General information:
TITO was launched using:
RESULT:
Template:
1OGP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 223 for 118 contacts (1.9/contact) +
2D Compatibility (PS) -3271 + (NN) -2050 + (LL) 796
1D Compatibility (HY) -1200 + (ID) 450
Total energy: -5952.0 ( -50.44 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_1OGP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OGP-query.scw
PDB file :
Tito_Scwrl_1OGP.pdb
: