Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGG-HGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
1TIK Chain:A ((3-178))
LSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIP-VLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYT-ENGP---EGLVTGKKAIVITSRGGIHKDGP------TDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSAE
General information:
TITO was launched using:
RESULT:
Template:
1TIK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106312 for 1317 contacts (-80.7/contact) +
2D Compatibility (PS) -19679 + (NN) -14681 + (LL) 620
1D Compatibility (HY) -15200 + (ID) 3500
Total energy: -158752.0 ( -120.54 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_1TIK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIK-query.scw
PDB file :
Tito_Scwrl_1TIK.pdb
: