Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQQFERSPSESYFWPVVLAVVLHVLIFAMLFVSWAFAPELPPSKPIVQATLYQLKSKSQATTQTNQKIAGEAKKTASKQYEVEQLEQKKLEQQKLEQQKLEQQQVAAAKAAEQKKADEARKAEAQKAAEAKKADEAKKAAEAKAAEQKKQADIAKKRAEDEAKKKAAEDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAVEAAKKKAAAAAAAARKAAEDKKARALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSARNGMSVEVLIEMLPDGTITNASVSRSS--GDKPFDSSAVAAVRNVGRIPEMQQLPRATFDSLYRQRRIIFKPEDLSL |
3F42 Chain:A ((39-77)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVSVSFNGLGELVDLQIDDSLLEDKEAMQIYLMSALNDGYKAVEENRKNLAFNMLG--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8470 for 188 contacts (-45.1/contact) +
2D Compatibility (PS) -4054 + (NN) -941 + (LL) 26744
1D Compatibility (HY) -2000 + (ID) 200
Total energy: 11079.0 ( 58.93 by residue)
QMean score : 0.430
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