Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNPILAGLGFSLPKRQVSNHDLVGRINTSDEFIVERTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLRHIPVLDIRAQCSGLLYGLQMARGQILAGLARHVLVVCGEVLSKRMDCSDRGRNLSILLGDGAGAVVVSAGESLEDGLLDLRLGADGNYFDLLMTAAPGSASPTFLDENVLREGGGEFLMRGRPMFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTL--AMFWPDIQPGQRVLVLTYGSGATWGAALYRKPEEVNRPC |
| 2EBD Chain:A ((1-308)) | MGTKII-GTGVYLPKNVLTNFDLEKIVDTSDEWITTRTGIKER-RIAKEETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEAVDWED--RSTCVLFGDGAGAVVVTRSEDKSD-ILATRMYAEGSLEELLHA-----------------DNCGYIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRIINALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEAIKEGKVKRGDLILMTAMGGGLTWGAVLLRY-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -267434 for 2866 contacts (-93.3/contact) +
2D Compatibility (PS) -32997 + (NN) -15464 + (LL) 896
1D Compatibility (HY) -24800 + (ID) 5900
Total energy: -345699.0 ( -120.62 by residue)
QMean score : 0.503
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