Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILPVPMLAAGLALLPSFAQAEFFADGKAGLELRNFYFNRDYRQPGASQSYSEEWAQGFLLRYESGYTEGLFGLGVDALGLLGVRLDSSPERSGSGL---LPYSTSDRRAAHDYSSLGLTAKLRVSHSTLKIGTLMPRLPVVQFNDTRLHPQTFQGGLLEVNEIDGLALQFGQLRQVKQRDSTNAEDLGITRGNKRNVLAGRHPGSDRFDFAGGTYRWSERLSSSYHYANLEDFYRQHHLGVQHLLPLADDQSLKSDIRWARSTDEG--GSR---------------------VNNRALNALFTYRLGGHAFGLGYQRMSGDSGFAYL-----AGTDPYLVNFVQIGDFANKDERSWQLRYDYDFAAIGLPGLTFMSRYLRGEHIDLLDGGGRGKEWERDTDIAYLVQSGPLKNLGIKLRNGTFRSDFGNDIDETRLIVSYALPLW |
| 4FRX Chain:A ((7-436)) | ---------------------AGFIEDSKASLTLRNFYINTDNR------SKQEEWGQGFILNYQSGFTQGTVGFGVDALGLLGVRL-----------GTVFPLE-SNGEPVHDFASLGLTAKAKVSNTEFRYGTLQPKLPVVTYNDGRLLPVTFEGGQVTSTDLKDFTLVAGQLEHSKGRNSTDNRSLSIAGANGSSASS---RDSNKFYYAGGDYKVNKDLTLQYYYGNLDDFYKQHFLGLIHNWQIGPG-VLKTDLRAFDSSSDGKNGSRSGRADGYVSSGYYGSGVTKGEVDNRAFSGLFTYTVSGHSIGAGYQILNGDSDFPFLNRGDGEGSTAYLITDVQIGKFQRAGERTWQVRYGYDFATVGVPGLTFNTIYLSGDKIKTAR--GDQSEWERDISLAYVIPDGTFKGLGFTWKNASFRSG---DQDENRLIVSYTLPLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4FRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12759 for 2818 contacts (-4.5/contact) +
2D Compatibility (PS) -36813 + (NN) 3941 + (LL) 1396
1D Compatibility (HY) -34400 + (ID) 9200
Total energy: -87835.0 ( -31.17 by residue)
QMean score : 0.229
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