Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSITSTDICQAADALKGFVGFNRKTGRYIVRFSEDSFGMDVADDSITPTSEFVWSSVRDDVMRLGREQLQILLEQNINERLNIGEPLLVYLRRQDLPEITAQRQLR
1BG1 Chain:A ((475-488))
----------------------KPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEPYTKQQLNNMSFAEIIMGYKIMDATNILVSPLVYLYPDIPKEEAFG
General information:
TITO was launched using:
RESULT:
Template:
1BG1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -320 for 31 contacts (-10.3/contact) +
2D Compatibility (PS) -1645 + (NN) -2704 + (LL) 1392
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -5177.0 ( -167.00 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_1BG1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BG1-query.scw
PDB file :
Tito_Scwrl_1BG1.pdb
: