Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRAVVELLAGARRLVIFTGAGVSAESGIPTFRDALGGLWARYDPAALATPAAFADDPALVWGWYEWRRLKVLGVQPNPAHRAIAALSGRIAN----TRLVTQNVDDLHERAGSRDVLHLHGSLHAPRCATC---AAAYRD----ALPDSVEPEEGRR-----IEP-PRCP--ACGGQVRPGVVWFGEALPEAALREAFAAACECDLLLSVGTSGVVQPAARIPGLALEHGASVVHVNPQPVRTRHPREHCLVGPAGEVLPELLRRAFPG
3RIG Chain:A ((16-272))
-----KFFAKAKHIVIISGAGV-------------GGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEALA-----
General information:
TITO was launched using:
RESULT:
Template:
3RIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135274 for 1796 contacts (-75.3/contact) +
2D Compatibility (PS) -24585 + (NN) -15195 + (LL) 1784
1D Compatibility (HY) -16400 + (ID) 4850
Total energy: -194520.0 ( -108.31 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_3RIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RIG-query.scw
PDB file :
Tito_Scwrl_3RIG.pdb
: