Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKALKTLFIATALLGSAAGV--QAADNFVGLTWGETSNNIQKSKSLNRNLNSPNLDKVIDNTGTWGIRAGQQ-FEQGRYYATYENISDTS-SGNKLRQQNLLGSYDAFLPIGDNNTKLFGGATLGLVKLEQDGKGFKRDSDVGYAAGLQAGILQELSKNASIEGGYRYLRTNASTEMTPHGGNKLGSLDLHSSSQFYLGANYKF |
| 3NB3 Chain:A ((1-170)) | --------------------APKDNTWYTGAKLGWSQ---------------------HENKLGAGAFGGYQVNPYVGFEMGYDWLGRMPY---AYKAQGVQLTAKLGYPITD-DLDIYTRLGGMVWRADTYSNVYGKNHDTGVSPVFAGGVEYAITPEIATRLEYQWTN-----------------------GMLSLGVSYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NB3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34827 for 942 contacts (37.0/contact) +
2D Compatibility (PS) -12768 + (NN) 2175 + (LL) 2504
1D Compatibility (HY) -2800 + (ID) 950
Total energy: 22988.0 ( 24.40 by residue)
QMean score : 0.052
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