Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLRNGVPSMTKDEKEKTHVDAI------IERYKDLMVEIPPADRQPGLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG
2HJD Chain:A ((22-61))
-------RGLSSADIETLTANAIRLHRQLLEKADQLFQVLPD-DIKIGTAAGGEQHLEYIEAMIEMHAQMSAVNTLVGLLGFIPKVS--------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HJD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6882 for 119 contacts (57.8/contact) +
2D Compatibility (PS) -3846 + (NN) -4731 + (LL) 3008
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -287.0 ( -2.41 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_2HJD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HJD-query.scw
PDB file :
Tito_Scwrl_2HJD.pdb
: