Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLAQFTPSALADLANCVLRIPLALQQPSSVAMTLPSLTSFMPHFGAPALLLLQLLAALPATAAETDATPLRFSVMESWSMPLVRLQRGQPIDGIVYDITRSLARQVGRKALYHPYPRGRIEQAMNAGEIDVRCYISPAWLSHDFPGYRWSVALLVQRDILVAREGFA--PIPEALPAQRIGTVLGYSYPR-LQALFDIGRLRRDDARTQDLVLEKLRAGRYRYAVSHQLSLHWSNRQAPGQPPLQEAAQLEETAVSCMVRDSAEVPVEAILKTFEEMKRSGEIEEILQRYR |
3H7M Chain:A ((7-229)) | ---------------------------------------------------------------RDRHRTIVVGGD-RDYPPYEFIDQNGKPAGYNVELTRAIAEVMGMTVEFRLGAWSEMFSALKSGRVDVLQ--GISWSEKRARQIDFTPPHTIVYHAIFARRDSPPAAGLEDLRGRKVALHRDGIMHEYLAERGY--GKDLVLTPTPADALRLLAAGGCDYAVVAMVPGMYIIRENRLTNLVPVARSIAAQRYGYAVRQGDAELLARFSEGLAILRKTGQYEAIRAKWL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H7M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101914 for 1813 contacts (-56.2/contact) +
2D Compatibility (PS) -23135 + (NN) -6115 + (LL) 5992
1D Compatibility (HY) -4800 + (ID) 1550
Total energy: -131522.0 ( -72.54 by residue)
QMean score : 0.402
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