Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDIETRVRKLVAARFGVEECDIRLDSDFRNDFGAESLEVVELVMALEAEFGVEIADDDAERIETVRQAIDYLEEAVPT
3EJB Chain:A ((20-92))
MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGH---
General information:
TITO was launched using:
RESULT:
Template:
3EJB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38536 for 480 contacts (-80.3/contact) +
2D Compatibility (PS) -8229 + (NN) -5945 + (LL) 352
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -61758.0 ( -128.66 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_3EJB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EJB-query.scw
PDB file :
Tito_Scwrl_3EJB.pdb
: