Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDNAIPQGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT
3JUQ Chain:A ((37-184))
-------------VAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLP-
General information:
TITO was launched using:
RESULT:
Template:
3JUQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27532 for 992 contacts (-27.8/contact) +
2D Compatibility (PS) -16000 + (NN) -7061 + (LL) 740
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -70053.0 ( -70.62 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_3JUQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUQ-query.scw
PDB file :
Tito_Scwrl_3JUQ.pdb
: