Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAFDAARYVHRYYASLAPAPGNEYPRLRAWEYLWEYVWDPSRSWDDLTAPEQLDTTALHLGFYLANWGMFRGSSGLLQNSNLDLMKALARQLFSGAGPELFELSLVDFAGNGARLAHNRKLLETVLGSMDALSSRVSWTDTLKSKILLGVWGEFPALDRHYVAACRALYPRRGLTSVNGGTLTALHRLIGEERLSFPRLETARKGLLYPTGRLADMAFFQYGLENA |
2JPK Chain:A ((11-26)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------PAYE--FIKGFGKGAIKEGNKDKWKNI--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2701 for 56 contacts (-48.2/contact) +
2D Compatibility (PS) -1618 + (NN) -118 + (LL) 12944
1D Compatibility (HY) -800 + (ID) 100
Total energy: 7607.0 ( 135.84 by residue)
QMean score : 0.109
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