Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQQVAKRAMTDTPDDRTGEASGLSKRQAFHRQHRQRAEEEARRLLDARAEQGGRWLDWVAGQLYLLRPPEYAAMVRRELQRLSGD
2DKX Chain:A ((33-48))
----------------------------------------------------QKWLLWTEHQ-YRLPPMGKAFQELAGKELCAMS
General information:
TITO was launched using:
RESULT:
Template:
2DKX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3104 for 63 contacts (-49.3/contact) +
2D Compatibility (PS) -1618 + (NN) -623 + (LL) 4092
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -2803.0 ( -44.49 by residue)
QMean score : 0.156
(partial model without unconserved sides chains):
PDB file :
Tito_2DKX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DKX-query.scw
PDB file :
Tito_Scwrl_2DKX.pdb
: