Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLKGKTALVTGSTSGIGLGIALSLAEAGADLLLNGFGEVDAALAQVRA-----RGVRAEHHPADLSSPEQIGELMAFAERTFGGVDILVNNAGIQYVAPVQEFPTERWDAIIAINLSSVFHTTRLALPGMLARGWGRIVNIASTHGLVASAGKSAYVAAKHGVLGLTKSVALETARTPVTCNAICPGWVLTPLVQKQIDARTAEGVSPEQAEHDLLAEKQPSLAFVTPEQLGGLTLFLCSEAADQVRGAAWNMDGGWVAQ
1X1T Chain:A ((2-260))
--LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-AEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRT-----------------------LLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWTAR
General information:
TITO was launched using:
RESULT:
Template:
1X1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -148025 for 2000 contacts (-74.0/contact) +
2D Compatibility (PS) -24591 + (NN) -7713 + (LL) 1680
1D Compatibility (HY) -20800 + (ID) 7350
Total energy: -206799.0 ( -103.40 by residue)
QMean score : 0.474
(partial model without unconserved sides chains):
PDB file :
Tito_1X1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X1T-query.scw
PDB file :
Tito_Scwrl_1X1T.pdb
: